Update taxonomic data

Usage

update_dico_name(
  genus_searched = NULL,
  tax_esp_searched = NULL,
  tax_fam_searched = NULL,
  tax_order_searched = NULL,
  id_searched = NULL,
  new_tax_gen = NULL,
  new_tax_esp = NULL,
  new_tax_fam = NULL,
  new_tax_order = NULL,
  new_tax_rank1 = NULL,
  new_tax_rank = NULL,
  new_tax_name1 = NULL,
  new_tax_famclass = NULL,
  new_introduced_status = NULL,
  new_tax_rankesp = NULL,
  ask_before_update = TRUE,
  add_backup = TRUE,
  show_results = TRUE,
  cancel_synonymy = FALSE,
  synonym_of = NULL,
  exact_match = FALSE
)

Arguments

genus_searched: string genus name searched
tax_esp_searched: string species name searched
tax_fam_searched: string family name searched
new_tax_gen: string new genus name
new_tax_esp: string new species name
new_tax_fam: string new family name
new_tax_rank1: string new rank
new_tax_name1: string new name of rank1
ask_before_update: logical TRUE by default, ask for confirmation before updating
add_backup: logical TRUE by default, add backup of modified data
show_results: logical TRUE by default, show the data that has been modified
synonym_of: list if the selected taxa should be put in synonymy with an existing taxa, add in a list at least one values to identify to which taxa it will be put in synonymy: genus, species or id
new_full_name_auth: string new full name with authors
new_taxook: integer new tax code
new_morphocat: integer new morphocat code
new_detvalue: integer new detvalue code
new_full_name_no_auth: string new full name without authors - if not provided concatenate of new_esp and new_genus
new_full_name_used: string new full_name_used
new_full_name_used2: string new full_name_used2
id_search: integer id of the taxa searched
no_synonym_modif: logical FALSE by default, if TRUE and if the selected taxa is considered as synonym, then this will be modified and the selected taxa will not longer be a synonym

Value

No return value individuals updated

Author

Gilles Dauby, gilles.dauby@ird.fr